Pepperoni Pizza on Cottage Cheese Crust – Cheesy, Classic & Low-Carb

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A close-up shot of a golden-brown pepperoni pizza on a cottage cheese crust, with one slice slightly pulled out. The crust is crispy and browned around the edges, topped with melted mozzarella cheese, curled pepperoni slices, and a sprinkle of herbs.

Craving that nostalgic slice of pepperoni pizza without the guilt? Imagine biting into a cheesy, saucy, golden-crusted pizza that’s actually low-carb, protein-packed, and secretly nutritious. Welcome to your new favorite weeknight dinner: Pepperoni Pizza on Cottage Cheese Crust.

This isn’t just any healthy pizza—it’s the perfect mix of comfort food satisfaction and smart eating. Whether you’re cutting carbs, ditching gluten, or just love trying creative recipes, this cottage cheese crust pizza brings everything to the table: crisp edges, melty mozzarella, savory pepperoni, and a surprisingly creamy crust that’ll keep you coming back for seconds.

Let’s dive into the magic of this simple yet unforgettable dish.


Why You’ll Love This Recipe ❤️

Have you ever had one of those nights where you want to eat something cozy and cheesy, but you also want to stick to your health goals? That’s exactly how this Pepperoni Pizza on Cottage Cheese Crust came to life in our kitchen.

This recipe checks all the right boxes:

  • Low-carb and gluten-free (perfect for keto or low-carb lifestyles)
  • High in protein thanks to the cottage cheese and eggs
  • Quick and easy – ready in under 30 minutes
  • Comforting and familiar – tastes just like your favorite slice
  • Customizable for picky eaters and foodies alike

Whether you’re cooking for yourself, your family, or just need a Friday night pizza fix without the carb crash, this one’s for you.


Ingredients 🧾

Here’s everything you’ll need to make your own Pepperoni Pizza on Cottage Cheese Crust at home:

For the Crust:

  • 1 cup cottage cheese
  • 2 large eggs
  • ½ cup almond flour (or oat flour for a lighter, nut-free version)
  • 1 tsp baking powder
  • Pinch of salt

For the Topping:

  • ½ cup marinara sauce (look for sugar-free or low-sugar options)
  • ¾ cup shredded mozzarella cheese
  • 12–15 slices pepperoni (traditional or turkey)
  • 2 tbsp grated Parmesan cheese
  • ½ tsp Italian seasoning
  • Fresh basil for garnish (optional but adds a pop of freshness)

Step-by-Step Directions 👩‍🍳

1. Preheat & Prep

Preheat your oven to 375°F (190°C). Line a baking sheet with parchment paper or lightly grease it with oil or nonstick spray.

🔥 Tip: A pizza stone works wonders here for an extra-crispy bottom.

2. Make the Crust

In a mixing bowl, combine:

  • Cottage cheese
  • Eggs
  • Almond (or oat) flour
  • Baking powder
  • Salt

Whisk or blend until the mixture is smooth and creamy. It’ll look a bit like pancake batter—don’t worry, that’s perfect.

Spread the batter evenly into a round pizza shape on the prepared baking sheet. Keep it about ¼-inch thick.

3. Bake the Crust

Pop it in the oven and bake for 15–18 minutes, or until the crust is set, firm to the touch, and lightly golden around the edges.

🍕 Pro Tip: Let it cool for 3–5 minutes before topping—it’ll help it hold together better.

4. Add Sauce & Cheese

Spread your marinara sauce evenly over the crust. Sprinkle the shredded mozzarella and Parmesan cheese generously over the top.

5. Add Pepperoni & Seasoning

Top with your slices of pepperoni, spacing them evenly. Sprinkle with Italian seasoning for that classic pizzeria flavor.

6. Bake Again

Return the pizza to the oven for another 8–10 minutes, or until the cheese is bubbly and starting to brown.

7. Cool & Serve

Let your pizza cool slightly before slicing. Garnish with fresh basil if using, and dig in while it’s warm and melty.

Finished homemade pepperoni pizza on cottage cheese crust with melted cheese and herbs

Serving & Storage Tips 🍽️

  • Serving Suggestion: Pair your Pepperoni Pizza on Cottage Cheese Crust with a fresh arugula salad, some roasted veggies, or a light soup for a well-rounded meal.
  • Storing Leftovers: Keep leftovers in an airtight container in the fridge for up to 2 days.
  • Reheating: For best results, reheat in the oven or toaster oven at 350°F until warm. Avoid microwaving if you want to keep the crust crisp.

Helpful Notes & Variations 🌿

This pizza is endlessly customizable. Here are some ideas to make it your own:

💡 Substitutions:

  • Flour Swap: Use oat flour for a nut-free version, or coconut flour (just reduce the amount).
  • Cheese Choices: Try sharp cheddar, provolone, or a dairy-free blend if needed.
  • Pepperoni Alternatives: Turkey pepperoni, salami, or plant-based options all work great.

🍄 Add-Ons:

  • Mushrooms, onions, bell peppers, olives, spinach—load it up!
  • Want a spicy kick? Add red pepper flakes or jalapeños.

🥕 Make It Vegetarian:

  • Just leave out the pepperoni and pile on your favorite veggies or meat-free sausage.

🌱 Make It Gluten-Free:

  • Already gluten-free if using almond or oat flour. Just double-check your marinara sauce!
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A close-up shot of a golden-brown pepperoni pizza on a cottage cheese crust, with one slice slightly pulled out. The crust is crispy and browned around the edges, topped with melted mozzarella cheese, curled pepperoni slices, and a sprinkle of herbs.

Pepperoni Pizza on Cottage Cheese Crust – Cheesy, Classic & Low-Carb


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  • Author: Samantha Green
  • Yield: 4 servings

Description

Enjoy this cheesy, low-carb Pepperoni Pizza on Cottage Cheese Crust. A protein-packed, gluten-free twist on a classic favorite—easy, delicious, and perfect for healthy pizza nights.


Ingredients

For the Cottage Cheese Crust:

1 cup cottage cheese

2 large eggs

½ cup almond flour (or oat flour for a lighter texture)

1 tsp baking powder

Pinch of salt

For the Topping:

½ cup marinara sauce (sugar-free if preferred)

¾ cup shredded mozzarella cheese

1215 slices pepperoni

2 tbsp grated Parmesan cheese

½ tsp Italian seasoning

Fresh basil for garnish (optional)


Instructions

Step 1: Preheat & Prep

Preheat oven to 375°F (190°C). Line a baking sheet with parchment paper or lightly grease it.

Step 2: Make the Crust

In a bowl, whisk together cottage cheese, eggs, almond flour, baking powder, and salt until smooth. Spread evenly into a round pizza shape on the prepared baking sheet.

Step 3: Bake the Crust

Bake for 15–18 minutes, until set and lightly golden.

Step 4: Add Sauce & Cheese

Spread marinara sauce evenly over the baked crust. Sprinkle mozzarella and Parmesan cheese on top.

Step 5: Add Pepperoni & Seasoning

Arrange pepperoni slices evenly over the cheese. Sprinkle with Italian seasoning.

Step 6: Bake Again

Return to the oven for 8–10 minutes, or until the cheese is melted and bubbly.

Step 7: Cool & Serve

Let cool slightly before slicing. Garnish with fresh basil if desired and serve warm.

Notes

Use turkey pepperoni for a lighter version.

Add mushrooms or bell peppers for extra toppings.

Store leftovers in the fridge for up to 2 days; reheat in the oven for best results.

 

  • Category: Dinner
  • Cuisine: American

Frequently Asked Questions (FAQs) ❓

1. Can I make the crust ahead of time?

Yes! You can bake the crust and store it in the fridge for up to 24 hours before adding toppings and finishing it in the oven.

2. Is this crust crispy or soft?

It’s soft in the center with slightly crispy edges—think thin, chewy flatbread. For a crisper crust, bake a few extra minutes or use a pizza stone.

3. What kind of cottage cheese should I use?

Full-fat or 2% cottage cheese works best for flavor and texture. Avoid fat-free versions—they can be watery.

4. Can I freeze this pizza?

You can freeze the crust (pre-baked) for up to 2 months. Just thaw, top, and bake when ready.

5. Is this suitable for a keto diet?

Absolutely. When made with almond flour and sugar-free marinara, it fits perfectly into a low-carb or keto lifestyle.


Nutritional Insight 🧠

While exact nutrition will vary, one serving (1/4 of the pizza) made with almond flour and full-fat cheese offers:

  • Around 220–260 calories
  • 16g protein
  • 4–6g net carbs
  • Low in sugar
  • Rich in calcium and healthy fats

That means you can satisfy your pizza cravings and still stick to your goals—no bloating, no carb crash.


Final Thoughts – It’s Pizza Night, Reimagined 🍕

If you’ve ever thought, “I wish I could eat pizza every day without feeling guilty,” this Pepperoni Pizza on Cottage Cheese Crust is your answer.

It’s cheesy, comforting, wholesome, and completely crave-worthy. Even the skeptics (yes, even the “I don’t do healthy food” crowd) will fall in love with this one. And you’ll love how easy it is to whip up with everyday ingredients.

Whether you’re meal-prepping for the week or throwing together a last-minute dinner, give this recipe a try—and don’t be surprised if it becomes a weekly favorite.

👉 Ready to make it? Snap a photo and tag your pizza masterpiece! Or share it with a friend who’s craving a healthier twist on a classic.

Let’s bring pizza night back—with a cheesy, low-carb twist that’s anything but boring. 🍕💛

Reader Favorites: Similar Recipes You’ll Also Love

If this Garlic & Spinach White Pizza on Cottage Cheese Crust won you over, you’ll fall in love with these other protein-packed, wholesome creations:

Looking for inspiration? Try this fluffy, pancake-inspired delight:
➡️ Cottage Cheese Banana Oat Pancakes

Check out this indulgent, microwave-friendly twist that’s rich and gooey:
➡️ Gooey Chocolate Pistachio Cottage Cheese Mug Cake

Discover fruity, air-fried morning treats that are light and crispy:
➡️ Air Fryer Cottage Cheese Apple Fritters

Don’t miss a comforting breakfast bake that’s big on protein:
➡️ Protein Boost Banana Blender Muffins

Want more guilt-free, high-protein recipes?
➡️ Follow me on Facebook for daily cooking ideas

Meet the Cook Behind Estongar Recipes

Hello! I'm Samantha, the passionate home cook behind Estongar Recipes. I created this blog to share simple, delicious meals that anyone can enjoy — no fancy tools or complicated steps, just real food made with heart. From cozy breakfasts to vibrant dinners, my goal is to inspire your everyday cooking.

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